Equipment of the facility

Instrumentation

• Orbitrap ID-X (Thermo Fisher Scientific)
• Vanquish UHPLC with DAD detector (Thermo Fisher Scientific), including several standard LC columns
• TissueLyser II (QIAGEN)

Data processing software

• Freestyle (Thermo Fisher Scientific)
• Compound Discoverer (Thermo Fisher Scientific)
• Mass Frontier (Thermo Fisher Scientific)
• MZmine (developed in the Pluskal lab; see www.mzmine.org)
• SIRIUS (SIRIUS Jena Uni link)

Mass spectral libraries

• NIST23
• mzCloud
• Global Natural Product Social Molecular Networking (GNPS)
• MassBank of North America (MoNA)
• MassBankEU
• In-house library of 20,000+ unique structures